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→Project maintenance to-dos
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* Add parent taxa for all taxon items semi-automatically - try to match first word in taxon name to a genus name, remaining items have to be added manually | * Add parent taxa for all taxon items semi-automatically - try to match first word in taxon name to a genus name, remaining items have to be added manually | ||
* Ensure that all items have a class, check that class "placeholder taxon" is consistently used | * Ensure that all items have a class, check that class "placeholder taxon" is consistently used | ||
* Find references that have only DOIs and link them to reference items, or create new reference items for them | * Find references that have only DOIs and link them to reference items, or create new reference items for them by Wikidata lookup | ||
Ideas: | Ideas: | ||
* Decouple taxonomy from interaction partners? Class "interaction partner" that is independent of "taxon", though interaction partners are also instances of taxon. "taxon" can then have a new property "part of taxonomic system" with a "reference" item. | |||
* Link prokaryote names to LPSN? | * Link prokaryote names to LPSN? | ||
* Add SILVA taxonomy for prokaryotes by mapping to NCBI taxon ID. Prefer SILVA to GTDB because more spp. represented by 16S, not just genomes | * Add SILVA taxonomy for prokaryotes by mapping to NCBI taxon ID. Prefer SILVA to GTDB because more spp. represented by 16S, not just genomes | ||
* Better documentation of the data modeling, example workflow for adding a new entry based on information in a publication | * Better documentation of the data modeling, example workflow for adding a new entry based on information in a publication | ||