Project:SPARQL/examples
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List all taxon items
PREFIX pp: <https://ppsdb.wikibase.cloud/entity/>
PREFIX ppt: <https://ppsdb.wikibase.cloud/prop/direct/>
SELECT DISTINCT ?item ?itemLabel WHERE {
?item ppt:P18 pp:Q2.
SERVICE wikibase:label { bd:serviceParam wikibase:language "[AUTO_LANGUAGE],en". }
}
List all interaction types and RO mapping if available
PREFIX pp: <https://ppsdb.wikibase.cloud/entity/>
PREFIX ppt: <https://ppsdb.wikibase.cloud/prop/direct/>
SELECT DISTINCT ?item ?itemLabel ?roterm WHERE {
?item ppt:P18 pp:Q1.
OPTIONAL {
?item ppt:P16 ?roterm
}
SERVICE wikibase:label { bd:serviceParam wikibase:language "[AUTO_LANGUAGE],en". }
}
List all body parts and GO mapping if available
PREFIX pp: <https://ppsdb.wikibase.cloud/entity/>
PREFIX ppt: <https://ppsdb.wikibase.cloud/prop/direct/>
SELECT DISTINCT ?item ?itemLabel ?goterm WHERE {
?item ppt:P18 pp:Q5.
OPTIONAL {
?item ppt:P17 ?goterm
}
SERVICE wikibase:label { bd:serviceParam wikibase:language "[AUTO_LANGUAGE],en". }
}
List all interactions, optionally the localization and interaction type
PREFIX pp: <https://ppsdb.wikibase.cloud/entity/>
PREFIX ppt: <https://ppsdb.wikibase.cloud/prop/direct/>
PREFIX pps: <https://ppsdb.wikibase.cloud/prop/>
PREFIX ppss: <https://ppsdb.wikibase.cloud/prop/statement/>
PREFIX ppsq: <https://ppsdb.wikibase.cloud/prop/qualifier/>
SELECT DISTINCT ?host ?hostLabel ?typeLabel ?symbiontLabel ?localizationLabel WHERE {
?host pps:P19 ?interaction.
?interaction ppss:P19 ?symbiont.
OPTIONAL {
?interaction ppsq:P20 ?localization.
}
OPTIONAL {
?interaction ppsq:P26 ?type.
}
SERVICE wikibase:label { bd:serviceParam wikibase:language "[AUTO_LANGUAGE],en". }
}