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NCBI taxon IDs requiring attention from NCBI Taxonomy team
Project maintenance to-dos
Chores:
- Process backlog of new references
- Add higher taxonomy (PR2 for eukaryotes, LPSN for prokaryotes) to permit queries by taxonomy -- The taxonomy version is tagged by linking to a reference item for that particular taxonomy version to the 'parent taxon' statement in a 'stated in' reference.
- Link prokaryote names to LPSN
- Create reference items from DOIs in references
- Ensure that all items have a class, check that class "placeholder taxon" is consistently used
Modeling:
- Sane way to model placeholder taxa and non-specific taxon statements? E.g. general statements like "all members of this family are associated with methanogens", without creating items for each individual?
- Modeling interactions: RO is insufficient?
- Add statements about metabolism ("phototroph", "nitrogen fixer") to symbiont items?
- Dummy taxon for "microbiome" to enable us to add references for microbiome studies?